Browse of TCMCG066C00503 protein

CDS

Accession Number	TCMCG066C00503
gbkey	CDS
Protein Id	XP_034580841.1
Location	join(4151960..4152058,4152167..4152289,4152389..4152589,4154333..4154422,4154585..4154740,4155538..4155654,4155814..4156020,4156532..4156633,4156740..4156871,4158134..4158264,4158341..4158460,4158643..4158748,4159464..4159661,4159751..4159869,4159950..4160100,4160185..4160297,4160369..4160450,4160543..4160629,4160714..4160791,4161814..4162008,4162503..4162595,4162663..4162776,4162860..4163018,4163106..4163161,4163235..4163307,4163404..4163594,4163699..4163831,4163906..4163983,4164331..4164495,4165542..4165712,4165783..4165917,4166291..4166434,4166513..4166635,4166727..4166819,4167026..4167148,4167340..4167440,4167564..4167683,4167774..4167849,4168125..4168211)
Gene	LOC117844184
GeneID	117844184
Organism	Setaria viridis

Protein

Length	1613aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA633601
db_source	XM_034724950.1
Definition	nuclear pore complex protein NUP205 isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14310        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005198        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0006999        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0017056        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044611        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCAACTTCATTTAGGCCCCAAGGAAGTTAAGGATGTATTTTCAATATTGAAAGACTGTGCAGCTGATGCAAATCAAAACACAAGTGTGGAGCTTCAGATCACCTATGGAGTTCTGTTTTCTCTTGTAGCAACTTTTATTTCTGATGCCCTAAGTACTTCTCATGAGAAAGGATCATTGTCATCATCTGATTCCTCATTTAGACATGAATTTCATGAACTCGTGATGAGGACAGGAAACAATACGACTGTTGAAGGATTTGTTGGTGTTGTGCGACTTGCATGGTCGGTTCATTTGATGCTAACTCAAGATCGAAGTAATTCAAGAGAAACGTCAGATATTTGGTCATGTCTGGAAATTATCTGTTGTCAAAATTCTTTTGAGTTTTTGCGGGAGCGAGTTTTGAAAACAGCTGCATACCAGAATGATGATGAGGACATTGTCTACATGTACACTGGCTACACACACAAGTTAATGATGTGCTTTATTTCCCACCCAACTTCTAGAGATAAGATAAAGGAAATTAAGGAAAAAGCAATGACTGCCCTCAGTCCATACGGGCCACCTCGAGATCATCGGGAAGATCCTGCTAGAAATGGGGAACAAGTTGGTCAGGCTACTAACGAGCCTTTTGTATCCTTGCTGGAGCTAATTAGAGAAATCTATCAGAAAGAGCCTGAGCTAGTGCATGGAAACGAGGAACTGTGGACTTTTGTTATATATGCAGGAGAAGACCATACCAACACACAAACTCTTGTGGCCTTCCTTGGACTTCTCAGTATTTTGGCTTCCACTGAAGTTGGTGCTGCCAAAGTCTATGAGCTGCTTCAGGGAAAAATTTATCGCTCAGTTGGGTGGAACACTCTGTTTGATTGCTTATCTATCTATGAGGAGAAGTTTAAAAAATCCATTCAATCTTCTGCAAGCATACTACCTGATTTTCCTGAGGGTGATGCACAGGCACTAGTTGCTTATTTATCAGTTCTTCAGAAGGTGGTGGAAAATGGGAATCCTATAGAACGAAGGAAATGGTTCCCTGATATTGAACCTTTATTTAAGCTTCTCAGCTATGAAAATGTGCCTCCGTACTTGAAGGGGGCTTTGCGAAATTCAATAGCCGCATTTATCAAAGTGTCACCCCTACTAAAAGACACTATTTGGAATTATCTTGAGCAATACGATCTTCCGGTGGTTACGGCTCCACTAGGGCACCATACAGCAACACAGATTTATGATATGAGATTTGAGTTGAATGAAGTGGAAGCAAGGAGGGAGAGTTACCCCTCGACCATATCTTTTCTCAAATTGATCAATGCACTTATTGCGGAAGAAAGAAACATAAGTGACAAAGGCCGGAGGTTCATGGGTATCTTTAAGTTTGTTTATGAAGATGTCTTTGGTCCTTTTTCTCAAAGAGCCTACGCTGACCCTCAGGAAAAATGGGAGCTTGCACTTGCCTGCCTGGAGCATTTCCGCATGGTTTTGAGCATGTATGACATAAATGATGATGATATTTATGCTTCTGTTAACACATCAGCCCCTTCATCCATCGAGAGACAGCTCCCTCTGCTAGAACTACTCAAAGATTTCATGAGTGGGAAAGCTGCATTCCGCAATATCATGAACATCATATTAGTGGGTGTTGACTCTCTTATCAATGAGCGAACCACACAAACATATGGTATTCTTTTGGAGAAAACAGTCCATCTATCTCTTGAAATATTTATTCTTGTCATGGAGAGAGATCTGGCTCTTGCTGATGTTTTCCGGCCACTCTACCAGCCATTGGATGTTGTTTTAGCACAAAATCATAGACAGATAGTAGCATTGCTAGAGTTTGTACGATATGACTATCTTCCCCAAATTCAACAGTGTTCAATAAAAATTATGGCCATCCTGAGTTCTAGAATAGTTGGCCTGGTACAGTTGCTTTTGAAAGCTGATGTTGGAAAAACTGTAATAGAAGATTACGCTGCTTGCTTGGAGTTCCGATTTGATGATTTTCAGGTTATAGAGGATACGAAAGATGATGTTGGAGTTCTAATACTGCAGTTGCTTCTTGACAATATTTGCCATCCAGCTCCAAACATAACACATTTGCTCTTGAGATTTGATGTCAATGGATCCATTGAGCGAACAGTTCTAAAACCAAAATCCCACTATAGTTGTTTGAAGGTAATCCTTGACAACCTCGAAAAGGTGACAAAGCCAGATATAAATGCCTTACTGCACGAGTTCAGTTTTCAGCTTCTCTACGAGTTATGTCTCGACCCTTTAACTTGTGGACCTGTTATGGATCTCCTAAGTACAAAGAAGTACCAGTTCTTTTCTAAGCATGTTGGAACCATCGGAGTTGCACCACTTCCAAAAAGGAACACTAACCAGTCTCTTCGTATCAGCATGCTCCATGAGAGGGCATGGTTGCTAAAGATGTTAGCACTGGCATTACATCTATCCGATGTATCATCATCTGTATACCGGGAAGCCTGTGTGGCTATTCTGTATCATACTTTTGGTCAGTGTGCCAATAACTTCCAGAGTACAAGCTTGTTCCATTCACGTGATGCTTCAACTGGCATTAGCAATGAATCAGGAAATAGAAATAAGGTTTTGGACTTGCTTGAGGTTTTACAGTTTAGATGTCCAGACACTTCAATGAAGTATCCACAGCTGCTTTCCAACCTGGGAGTTGAACCAAAGATTGAGGAGATTCTAAGGAACTCTGCGACATCTGAATTCGGTGGTGTATATTATTATTCAGAGAGAGGTGACCGACTGATTGATCTGGATGCTTTCCATGAAAAACTTCTCCAGATAACACAAGAGTTGAACTCACAATTAAGTGAGTCTGAGAAAGGCGAAGTAAAAGAATCAGTTCATCATTTGCTGAAATGGGCTTGGCGATATAACAAAAATCTTGAAGAGCAGGCTGCCCAACTTCACATGTTGACTGGCTGGTCACAGATTGTTGAAGTTGCTGTATCAAGAAGAATGTCATTACTTGAGGACCGTTCTAAGCTGTTGTTTGAGCTGCTTGATGCTTCATTGAGTGCCACAACATCTCCAGATTGTTCAGTGAAAATGGCATATGTTTTAACCAATGTATCATTGACCTGTATGGCTAAACTGCGGGATGAAAGATTCATATGCCCAGCTGGTGCAGATTCTGATGCAGTCACTTGCCTTGACATTATTTCATCGAAGCAGCTACCAAATGCAGCTTGTAACTCATTATTATTTAAGCTTGTGATGGCGATACTAAGAAATGAATCATCTGAAACCTTGAGAAGACGGCAATATGCATTATTATTGAGTTATTTTCAATATTGTCGTAGCATTCTTGACTCTGATGTCCCTCCATCAGTTCTACGGTTCTTGCTACTGGAGGAACAAGAAGCTGATGATGACGACTTCACTCTTCAAAAGGTTCTCAAGGAGCACAATGAATTAGCACGTGGCAACTTTTCCATCATAAGGAAGGAAGCTCAAGCTATTGTCGATTTGGTTACTAAGGATGCCATCCATGGGAGTGAAGCTGGCAAAGCAATTTCCTTCTATGTTCTTGATGCACTAATTAGTGTTGATCATGAAAAGTATTTTTTGAACCAGCTTCAAAGTCGAGGGATTCTTAGATCATGTCTAAGTGATGTTACAACCTATTTGTCAAAGGATTCGTCATTCACATCAGAATCTTCACAGCGGTTTTGCAAAGTTGATGCTCAGTTGTCATTACTGCTGAGAATAAGTCATCACTATGGCAAACATGGCTCTCAGATTTTGTTGTCCATGGGTGCTTTACAAAACCTTTCATCTTGCAACCTCATGGGTGTGCAAAAAAAGGGAAATTCGCGGGCAATATCCAATATCGTAAAGGAACGGGCTGGTGAAATTGACAAGAAGAGGTCACTTATTGCACCTGTACTGCGAATAGTCACCTCTTTTACATCACTCGTGGACTCGGCTGATTTTCTTGAGGTGAAGAACAAAATTGTACGAGAGATAGTGGACTTCACAAAGCAGCATCAGTCAGTTTTTAATAGCATTTTAAGGGAGAACATGTCTGGAGCTAATTTGTTCACATTGGAGCGTCTTAGCTTGGTGGTTTCTGTTCTCAGCAAGGTGTGGGCATATGAGGAAAATGAGGAATGCAGCTATATCCAAGATCTATTTGCCTTGATGCATTCTCTTTTCAGCCTTGACTTTGGGTCTCTGAATTTTATGCAATCGCCAAACATGATTGAGAATCAGAAGTCAGAATTGAGAGCGTTTGGTCTTTGCTTCAGCCTTATATCTTACCTGTATGTTCTGGCTACAAAGAAGAACATGCGATTTCAAGTTTCTTATGACCATAATAGTGACCAGCAGCAACCAACACTACAAATGGTTTCCGATCTTCTGAGTTCAATAACACTAGCCATAGAAAGAGTAGCTGAAGAAAAATATATGCTACTAAACAAGGTTCGTGACCTGAATGAGTTATCCAGAAAGGAGGTTGATGAGATAATAAAATTATGTATGAAGCAAGATTGCATCTCTCCCAATGATAATATCCGTAAAAGGAGGTACATTGCAATGATAGATTTGTGTTGCATGGCTGGGAACCGAGACCAGCTTATAACCCTTCTGCTCCAAATAGCGGAATGTGCCATTACTATTCTCCTTGTTCATTTCCAGGACGAGAGTTGCGCAAAAGATCTTTCTCCATTTTCTGATGATCTACTTCCTGTGCTGGAGAGGCTAGAACATTTAAAAGAGGATAAAGTTGGACGTAGTAGTCTGAAGTTGTTCCACAGATCTGTGACCACACTGAAGGAGATGACCATCAGATGCATGACCGTATGA

Protein:   MQLHLGPKEVKDVFSILKDCAADANQNTSVELQITYGVLFSLVATFISDALSTSHEKGSLSSSDSSFRHEFHELVMRTGNNTTVEGFVGVVRLAWSVHLMLTQDRSNSRETSDIWSCLEIICCQNSFEFLRERVLKTAAYQNDDEDIVYMYTGYTHKLMMCFISHPTSRDKIKEIKEKAMTALSPYGPPRDHREDPARNGEQVGQATNEPFVSLLELIREIYQKEPELVHGNEELWTFVIYAGEDHTNTQTLVAFLGLLSILASTEVGAAKVYELLQGKIYRSVGWNTLFDCLSIYEEKFKKSIQSSASILPDFPEGDAQALVAYLSVLQKVVENGNPIERRKWFPDIEPLFKLLSYENVPPYLKGALRNSIAAFIKVSPLLKDTIWNYLEQYDLPVVTAPLGHHTATQIYDMRFELNEVEARRESYPSTISFLKLINALIAEERNISDKGRRFMGIFKFVYEDVFGPFSQRAYADPQEKWELALACLEHFRMVLSMYDINDDDIYASVNTSAPSSIERQLPLLELLKDFMSGKAAFRNIMNIILVGVDSLINERTTQTYGILLEKTVHLSLEIFILVMERDLALADVFRPLYQPLDVVLAQNHRQIVALLEFVRYDYLPQIQQCSIKIMAILSSRIVGLVQLLLKADVGKTVIEDYAACLEFRFDDFQVIEDTKDDVGVLILQLLLDNICHPAPNITHLLLRFDVNGSIERTVLKPKSHYSCLKVILDNLEKVTKPDINALLHEFSFQLLYELCLDPLTCGPVMDLLSTKKYQFFSKHVGTIGVAPLPKRNTNQSLRISMLHERAWLLKMLALALHLSDVSSSVYREACVAILYHTFGQCANNFQSTSLFHSRDASTGISNESGNRNKVLDLLEVLQFRCPDTSMKYPQLLSNLGVEPKIEEILRNSATSEFGGVYYYSERGDRLIDLDAFHEKLLQITQELNSQLSESEKGEVKESVHHLLKWAWRYNKNLEEQAAQLHMLTGWSQIVEVAVSRRMSLLEDRSKLLFELLDASLSATTSPDCSVKMAYVLTNVSLTCMAKLRDERFICPAGADSDAVTCLDIISSKQLPNAACNSLLFKLVMAILRNESSETLRRRQYALLLSYFQYCRSILDSDVPPSVLRFLLLEEQEADDDDFTLQKVLKEHNELARGNFSIIRKEAQAIVDLVTKDAIHGSEAGKAISFYVLDALISVDHEKYFLNQLQSRGILRSCLSDVTTYLSKDSSFTSESSQRFCKVDAQLSLLLRISHHYGKHGSQILLSMGALQNLSSCNLMGVQKKGNSRAISNIVKERAGEIDKKRSLIAPVLRIVTSFTSLVDSADFLEVKNKIVREIVDFTKQHQSVFNSILRENMSGANLFTLERLSLVVSVLSKVWAYEENEECSYIQDLFALMHSLFSLDFGSLNFMQSPNMIENQKSELRAFGLCFSLISYLYVLATKKNMRFQVSYDHNSDQQQPTLQMVSDLLSSITLAIERVAEEKYMLLNKVRDLNELSRKEVDEIIKLCMKQDCISPNDNIRKRRYIAMIDLCCMAGNRDQLITLLLQIAECAITILLVHFQDESCAKDLSPFSDDLLPVLERLEHLKEDKVGRSSLKLFHRSVTTLKEMTIRCMTV